Applied Biosystems Optimizes Throughput of 3730 Series DNA Analyzers for Direct Medical Sequencing Projects With New Resequencing System FOSTER CITY, Calif. & MARCO ISLAND, Fla.--(BUSINESS WIRE)--Feb. 8,
2006--
TargetSeq(TM) Resequencing System Increases Sample Throughput of
3730xl DNA Analyzer up to 100 Percent; Provides Cost-Effective
Solution for Resequencing and Direct Medical Sequencing
At the 7th Annual Advancing Genome Biology and Technology (AGBT)
Meeting, Applied Biosystems (NYSE:ABI), an Applera Corporation
business, today introduced its TargetSeq(TM) Resequencing System, a
new software system for high-throughput directed or medical sequencing
designed for use with Applied Biosystems 3730 and 3730xl DNA
Analyzers.
The TargetSeq(TM) Resequencing System features a fast-run software
module for the sequencing of individual gene exons or other small DNA
fragments. TargetSeq(TM) is able to produce 200 to 400 base pair
sequencing reads in 20 minutes or less, increasing the daily
production capacity of the 3730 series instruments to greater than 2.8
megabases or 6912 samples (72 runs) per day.
"We expect Applied Biosystems' TargetSeq(TM) Resequencing System
will have a tremendous impact on our medical sequencing projects where
we focus on small, but very important regions of the human genome to
identify mutations in complex diseases, such as various cancers," said
Kevin J. McKernan, Vice President and Chief Scientist, Agencourt
Bioscience Corporation. "The TargetSeq(TM) module effectively cuts our
machine amortization by more than half and increases our Q40 bases,
lowering our overall costs. We now think twice about using sequencing
technology which requires 30 times coverage to achieve one-tenth the
accuracy." The number of Q40 bases is a standard measure of the
accuracy of DNA base calling results.
According to recent industry data, directed sequencing, also known
as medical sequencing, will represent the majority of sequencing
projects over the next several years as researchers transition from de
novo sequencing to targeted sequencing of coding areas of the human
genome.
"We were able to obtain promising data from both our own samples
and from controls provided during our testing of the TargetSeq(TM)
Resequencing System," said Chris Clee, Sequencing Facility Manager,
The Wellcome Trust Sanger Institute. "There is also potential to
utilize the TargetSeq(TM) module for one of our large resequencing
projects tailored to the 400bp range of products. This will allow us
to run more samples in a smaller footprint and free up instruments for
longer read requirements."
"The introduction of the TargetSeq(TM) system into our lab has
dramatically increased our throughput on re-sequencing projects, such
as those focused on melanoma and prostate cancer. We can now tailor
our sequence runs to individual projects," added Steve Mastrian,
Assistant Director, DNA Sequencing, Translational Genomics Research
Institute (TGen).
The TargetSeq(TM) Resequencing System also includes a new version
of the KB(TM) Basecaller software optimized for heterozygote/mixed
base detection and added flexibility for de novo and directed
sequencing applications.
"We are pleased to offer another advance in DNA sequencing based
on our gold-standard capillary electrophoresis technology," said
Catherine M. Burzik, President, Applied Biosystems. "As resequencing
applications become the primary focus of sequencing work,
TargetSeq(TM) addresses the industry's need for a more cost-effective,
robust, and scalable solution that provides a foundation for the
emerging field of personalized medicine."
A poster presentation describing the TargetSeq(TM) system,
entitled "A Fast Run Module Optimized for Medical Sequencing for the
Applied Biosystems 3730 Series DNA Analyzers (poster #7)," will be
presented at AGBT on Thursday, February 9, from 1 to 2:30 p.m.
About Applera Corporation and Applied Biosystems
Applera Corporation consists of two operating groups. The Applied
Biosystems Group serves the life science industry and research
community by developing and marketing instrument-based systems,
consumables, software, and services. Customers use these tools to
analyze nucleic acids (DNA and RNA), small molecules, and proteins to
make scientific discoveries and develop new pharmaceuticals. Applied
Biosystems' products also serve the needs of some markets outside of
life science research, which we refer to as "applied markets," such as
the fields of: human identity testing (forensic and paternity
testing); biosecurity, which refers to products needed in response to
the threat of biological terrorism and other malicious, accidental,
and natural biological dangers; and quality and safety testing, for
example in food and the environment. Applied Biosystems is
headquartered in Foster City, CA, and reported sales of nearly $1.8
billion during fiscal 2005. The Celera Genomics Group is focused on
discovery, development, and commercialization of diagnostic products
as well as leveraging its proteomic, bioinformatic, and genomic
capabilities to identify and validate drug targets, and is also
seeking to advance therapeutic antibody and selected small molecule
drug programs in collaboration with global technology and market
leaders. Information about Applera Corporation, including reports and
other information filed by the company with the Securities and
Exchange Commission, is available at http://www.applera.com, or by
telephoning 800-762-6923. Information about Applied Biosystems is
available at http://www.appliedbiosystems.com.
Applied Biosystems Forward-Looking Statements
Certain statements in this press release are forward-looking.
These may be identified by the use of forward-looking words or phrases
such as "should," "planned," and "expect," among others. These
forward-looking statements are based on Applera Corporation's current
expectations. The Private Securities Litigation Reform Act of 1995
provides a "safe harbor" for such forward-looking statements. In order
to comply with the terms of the safe harbor, Applera Corporation notes
that a variety of factors could cause actual results and experience to
differ materially from the anticipated results or other expectations
expressed in such forward-looking statements. These factors include
but are not limited to (1) rapidly changing technology and dependence
on the development and customer acceptance of new products; (2) sales
dependent on customers' capital spending policies and
government-sponsored research; (3) Applied Biosystems' dependence on
the operation of computer hardware, software, and Internet
applications and related technology; and (4) other factors that might
be described from time to time in Applera Corporation's filings with
the Securities and Exchange Commission. All information in this press
release is as of the date of the release, and Applera does not
undertake any duty to update this information, including any
forward-looking statements, unless required by law.
For Research Use Only. Not for use in diagnostic procedures.
Purchase of this software product alone does not imply any license
under any process, instrument or other apparatus, system, composition,
reagent or kit rights under patent claims owned or otherwise
controlled by Applera Corporation, either expressly or by estoppel.
Applied Biosystems, AB (Design) and Celera are registered
trademarks and Applera, Celera Genomics, KB, and TargetSeq are
trademarks of Applera Corporation or its subsidiaries in the U.S.
and/or certain other countries. (C) Copyright 2006 Applera
Corporation. All rights reserved.
CONTACT: Applied Biosystems
Sophia Patel, 650-554-2732 (Media)
sophia.patel@appliedbiosystems.com
Peter Dworkin, 650-554-2479 (Investors)
dworkipg@appliedbiosystems.com
SOURCE: Applied Biosystems
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